Prediction of biodegradation from the atom-type electrotopological state indices.

نویسنده

  • J Huuskonen
چکیده

A group contribution method based on atom-type electrotopological state indices for predicting the biodegradation of a diverse set of 241 organic chemicals is presented. Multiple linear regression and artificial neural networks were used to build the models using a training set of 172 compounds, for which the approximate time for ultimate biodegradation was estimated from the results of a survey of an expert panel. Derived models were validated by using a leave-25%-out method and against two test sets of 12 and 57 chemicals not included in the training set. The squared correlation coefficient (r2) for a linear model with 15 structural parameters was 0.76 for the training set and 0.68 for the test set of 12 molecules. The model predicted correctly the biodegradation of 48 chemicals in the test set of 57 molecules, for which biodegradability was presented as rapid or slow. The use of artificial neural networks gave better prediction for both test sets when the same set of parameters was tested as inputs in neural network simulations. The predictions of rapidly biodegradable chemicals were more accurate than the predictions of slowly biodegradable chemicals for both the regression and neural network models.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Lipophilicity study of salicylamide.

Molecular lipophilicity was studied using salicylamide as a model drug. Log P value for the target compound was experimentally determined by the shake-flask method and calculated using nine different computer programs based on atom/fragment contributions, structural parameters, atom-type electrotopological-state indices and neural network modeling, or topological structure descriptors. Our anal...

متن کامل

Prediction of soil sorption coefficient of organic pesticides from the atom-type electrotopological state indices.

A group contribution approach based on atom-type electrotopological state indices for predicting the soil sorption coefficient (log KOC) of a diverse set of 201 organic pesticides is presented. Using a training set of 143 compounds, for which the log KOC values were in the range from 0.42 to 5.31, multiple linear regression (MLR) and artificial neural networks were used to build the models. The...

متن کامل

Novel Atom-Type-Based Topological Descriptors for Simultaneous Prediction of Gas Chromatographic Retention Indices of Saturated Alcohols on Different Stationary Phases

In this work, novel atom-type-based topological indices, named AT indices, were presented as descriptors to encode structural information of a molecule at the atomic level. The descriptors were successfully used for simultaneous quantitative structure-retention relationship (QSRR) modeling of saturated alcohols on different stationary phases (SE-30, OV-3, OV-7, OV-11, OV-17 and OV-25). At first...

متن کامل

Modeling Antileukemic Activity of Carboquinones with Electrotopological State and Chi Indices

The antileukemic activity (medium effective dose, MED) of a set of 37 carboquinones was modeled using a combination of the electrotopological state (E-state) and molecular connectivity indices with multiple linear regression. A four-variable model gave good statistics: r2 = 0.90, s = 0.21. Using the leave-one-out method, the cross-validation statistics indicate a model useful for prediction: r2...

متن کامل

Estimation of Aqueous Solubility for a Diverse Set of Organic Compounds Based on Molecular Topology

An accurate and generally applicable method for estimating aqueous solubilities for a diverse set of 1297 organic compounds based on multilinear regression and artificial neural network modeling was developed. Molecular connectivity, shape, and atom-type electrotopological state (E-state) indices were used as structural parameters. The data set was divided into a training set of 884 compounds a...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Environmental toxicology and chemistry

دوره 20 10  شماره 

صفحات  -

تاریخ انتشار 2001